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HRA administration: what it involves and what it costs

HRA administration is the back-office work that keeps a health reimbursement arrangement compliant and running: plan documents, coverage substantiation, and tax-free reimbursements. This guide covers what it includes, what it costs, how to choose an administrator, and where an independent broker fits in.

By Joe Rosenblatt · Founder & ICHRA Broker, The ICHRA Broker

Key facts

Core jobs
Compliance, substantiation, reimbursements
Pricing
Per-employee-per-month (PEPM)
Applies to
ICHRA, QSEHRA, integrated HRAs
Broker role
Independent setup + guidance

What HRA administration includes

  • A compliant written plan document and required employee notices.
  • Verifying (substantiating) employees'' coverage and expenses.
  • Processing tax-free reimbursements, often via payroll.
  • An employee portal for enrollment and expense submission.
  • Recordkeeping for audits, renewals, and annual re-verification.

What HRA administration costs

Most administrators charge a per-employee-per-month (PEPM) fee, sometimes with a small base or setup fee. Service level is the main price driver — self-serve software is cheaper, full-service administration costs more. This fee is separate from, and much smaller than, the reimbursement budget you set for employees.

How to choose an HRA administrator

  • Strong employee enrollment support, not just a portal.
  • Automatic substantiation of coverage and expenses.
  • Payroll integration.
  • Transparent PEPM pricing with no surprise setup or per-claim fees.
  • Multi-state capability for distributed teams.
  • Responsive support when something goes wrong.

Software vs full-service vs broker-supported

Pure software is cheapest but leaves plan design and employee questions to you. Full-service offloads the work at a higher cost. A broker-supported setup pairs a platform with a human advisor — usually the best balance for a small business, since the hardest part is getting employees enrolled in good individual plans.

Substantiation and payroll

Two mechanics make or break administration: substantiation (proving coverage to keep reimbursements tax-free) and payroll integration (so reimbursements flow cleanly). Automating both removes the compliance risk and manual drag that come from doing it by hand.

Where a broker fits

An administrator runs the mechanics; a broker makes sure the plan design is right and that employees end up with coverage they''re happy with. As an independent broker, we''re platform-agnostic — we recommend the setup that fits your business and guide your team through enrollment. Many businesses use a broker plus an administration platform together.

Red flags to avoid

  • No real employee enrollment support.
  • Opaque pricing or surprise setup and per-claim fees.
  • Manual substantiation that risks the tax-free status.
  • No payroll integration.
  • Pressure toward a specific platform without a clear reason.

What good administration actually handles

Solid administration takes the compliance weight off your desk.

  • Maintaining the plan document and required notices.
  • Collecting and reviewing proof of coverage and expenses.
  • Processing reimbursements and coordinating with payroll.
  • Answering employee questions during enrollment and beyond.

In-house vs. outsourced administration

You can run an HRA yourself, but the substantiation, recordkeeping, and compliance details add up quickly, and mistakes carry tax risk. Most employers outsource to a software platform or a broker-supported service so the tax-free treatment is protected and their time stays on the business.

Questions to ask a potential administrator

Before you commit, get clear answers on the essentials.

  • How do you handle substantiation and proof of coverage?
  • How are reimbursements paid, and how fast?
  • Do you coordinate with payroll and produce required notices?
  • What compliance support and audit protection do you provide?
  • What are the total fees, and are there setup or per-employee charges?

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Frequently asked questions

Plan documents and notices, verifying employees'' coverage and expenses, processing tax-free reimbursements, and recordkeeping for compliance.

JR

Joe RosenblattFounder & ICHRA Broker, The ICHRA Broker

Joe Rosenblatt is the founder of The ICHRA Broker, an independent ICHRA brokerage that helps small businesses offer tax-free health benefits without a group plan. He works directly with employers and their advisors on ICHRA and QSEHRA setup, plan design, and compliance.

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